Basic Information
Locus ID:
Pt_Chr0601554
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Short Name:
HMT3
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 38616546 | 38618353 | - | Pt_Chr0601554 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 39,136.27 Da | 45.12 | 84.00 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 28 | 346 | 1.4E-79 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 23 | 349 | 1.01E-82 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 19 | 345 | 1.2E-102 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 143 | 274 | 91.0 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 311 | 355 | 2.1 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 12 | 135 | 3.5E-6 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 16 | 346 | 45.906483 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22740.1 | homocysteine S-methyltransferase 3. homocysteine S-methyltransferase (HMT3) | 0 |
| RefSeq | XP_051220679.1 | homocysteine S-methyltransferase 4-like isoform X2 [Lolium perenne] | 0 |
| Q9FUM7 | Homocysteine S-methyltransferase 4 OS=Zea mays OX=4577 GN=HMT-4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6EJJ4 | Hcy-binding domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology