Basic Information
Locus ID:
Pt_Chr0601126
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 26177702 | 26179073 | + | Pt_Chr0601126 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.57 | 40,549.96 Da | 35.06 | 81.01 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 141 | 280 | 1.9E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 36 | 348 | 7.36E-60 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 28 | 102 | 3.5E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 152 | 359 | 1.0E-51 | - |
| SMART | SM00220 | serkin_6 | 53 | 324 | 2.2E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 53 | 352 | 26.166994 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 199 | 211 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 59 | 81 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 376 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52540.2 | - | 0 |
| RefSeq | XP_047057915.1 | PTI1-like tyrosine-protein kinase At3g15890 [Lolium rigidum] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6TYB6 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology