Basic Information
Locus ID:
Pt_Chr0601036
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 23805645 | 23809365 | + | Pt_Chr0601036 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 48,175.82 Da | 39.86 | 88.70 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 122 | 399 | 1.3E-35 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 104 | 401 | 2.43E-60 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 96 | 186 | 4.9E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 201 | 418 | 2.5E-51 | - |
| SMART | SM00220 | serkin_6 | 122 | 401 | 1.8E-16 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 122 | 388 | 33.17746 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 128 | 150 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 244 | 256 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 422 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65600.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_044367307.1 | L-type lectin-domain containing receptor kinase IX.2-like [Triticum aestivum] | 0 |
| Q9LSL5 | L-type lectin-domain containing receptor kinase IX.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK92 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IYC3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.6HG0538650.1, HORVU.MOREX.r3.6HG0538670.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_016500, gene-QYE76_058420 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0202282, Pt_Chr0601036, Pt_Chr0601042 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC4BG062990 |
| Poaceae | Triticum aestivum | 4 | TraesCS3B02G588200.1, TraesCS4B02G387600.1 ... |