halophFGD

Basic Information

Locus ID: Pt_Chr0600870

Species & Taxonomic ID: Puccinellia tenuiflora & 240906

Genome Assembly: GCA_012064385.1

Description: Protein of unknown function (DUF295)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr06	20371533	20376116	+	Pt_Chr0600870

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.82	92,800.68 Da	48.29	79.00	-0.27

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03478	Protein of unknown function (DUF295)	741	804	1.5E-12	IPR005174
Pfam	PF03478	Protein of unknown function (DUF295)	314	362	1.3E-10	IPR005174

Best hit

Source	Best Hit ID	Description
TAIR	AT5G53780.1	Protein of unknown function (DUF295).
RefSeq	XP_051212728.1	uncharacterized protein LOC127330612 [Lolium perenne]
TrEMBL	A0A0E0KMM5	DUF295 domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	14	AH01.2523, AH09.173, AH09.174, BH05.2976, BH09.248, BH09.249 ... BH09.252, BH09.253, BH09.254, CH09.228, CH09.229, CH09.230, CH09.231, CH09.232
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_4AG0326860, gene-QOZ80_4AG0326870 ... gene-QOZ80_4AG0326880, gene-QOZ80_4BG0358880, gene-QOZ80_4BG0358910, gene-QOZ80_4BG0358920
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.2HG0216960.1.CDS1 ... HORVU.MOREX.r3.7HG0737060.1.CDS1
Poaceae	Lolium multiflorum	5	gene-QYE76_008931, gene-QYE76_059393, gene-QYE76_071439 ... gene-QYE76_071440, gene-QYE76_071502
Poaceae	Oryza coarctata	4	Oco07G000410, Oco07G000420, Oco08G001100, Oco08G001110
Poaceae	Oryza sativa	5	LOC_Os04g08070.1, LOC_Os04g08110.1, LOC_Os04g08160.1 ... LOC_Os04g08240.1, LOC_Os04g08250.1
Poaceae	Paspalum vaginatum	2	gene-BS78_06G024900, gene-BS78_09G061200
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0100159, Pt_Chr0100276, Pt_Chr0504713, Pt_Chr0600870 ... Pt_Chr0605885
Poaceae	Thinopyrum elongatum	1	Tel1E01G186700
Poaceae	Triticum dicoccoides	1	gene_TRIDC7AG006610
Poaceae	Triticum aestivum	23	TraesCS1B02G056200.1.cds1, TraesCS1D02G043800.1.cds1 ... TraesCS1D02G098800.1, TraesCS2A02G561500.1.cds1, TraesCS2A02G562900.1.cds1, TraesCS2A02G563000.1.cds1, TraesCS2B02G622100.1, TraesCS2B02G623500.1, TraesCS2B02G623600.1.cds1, TraesCS2D02G569000.1.cds1, TraesCS2D02G569600.1, TraesCS2D02G572400.1.cds1, TraesCS2D02G572500.1, TraesCS4A02G428400.1, TraesCS4B02G399300.1.cds1, TraesCS7A02G061400.1.cds1, TraesCS7A02G130200.1, TraesCS7A02G310800.1.cds1, TraesCS7B02G030500.1, TraesCS7D02G056200.1, TraesCS7D02G129600.1, TraesCSU02G115100.1.cds1, TraesCSU02G162500.1.cds1