Basic Information
Locus ID:
Pt_Chr0600823
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 19262270 | 19265284 | + | Pt_Chr0600823 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 72,502.34 Da | 37.97 | 95.68 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 347 | 612 | 1.16512E-86 | - |
| Pfam | PF00069 | Protein kinase domain | 342 | 605 | 1.7E-49 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 156 | 245 | 8.0E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 32 | 122 | 3.7E-16 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 319 | 610 | 9.58E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 304 | 416 | 8.0E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 417 | 619 | 1.1E-57 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 23 | 125 | 2.1E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 149 | 248 | 3.5E-12 | IPR038408 |
| SMART | SM00220 | serkin_6 | 341 | 609 | 5.0E-34 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 22 | 125 | 17.946239 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 341 | 621 | 41.035961 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 140 | 249 | 13.021896 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 462 | 474 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 347 | 370 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_051228636.1 | cysteine-rich receptor-like protein kinase 44 [Lolium perenne] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453T8M9 | Cysteine-rich receptor-like protein kinase 25 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology