Basic Information
Locus ID:
Pt_Chr0600798
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 18527536 | 18535545 | + | Pt_Chr0600798 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 183,265.44 Da | 49.47 | 89.74 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 432 | 576 | 4.7E-17 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 122 | 266 | 5.3E-17 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1011 | 1269 | 2.2E-40 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 666 | 924 | 2.2E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 647 | 947 | 1.62E-59 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 992 | 1293 | 1.48E-59 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 602 | 3.42E-47 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1384 | 1615 | 9.97E-21 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 27 | 292 | 2.6E-46 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1080 | 1287 | 6.9E-45 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1450 | 1621 | 2.0E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 735 | 942 | 6.9E-45 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 286 | 6.6E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 420 | 596 | 6.6E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1350 | 1449 | 2.9E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 18 | 109 | 1.4E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 638 | 734 | 6.0E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 328 | 419 | 6.0E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 983 | 1079 | 6.0E-19 | - |
| SMART | SM00220 | serkin_6 | 662 | 932 | 4.2E-18 | IPR000719 |
| SMART | SM00220 | serkin_6 | 42 | 277 | 2.1E-10 | IPR000719 |
| SMART | SM00220 | serkin_6 | 1007 | 1277 | 4.2E-18 | IPR000719 |
| SMART | SM00220 | serkin_6 | 352 | 587 | 9.8E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 42 | 587 | 20.258982 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1007 | 1277 | 31.566181 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 662 | 932 | 31.566181 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 433 | 445 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1123 | 1135 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 123 | 135 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 778 | 790 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1300 | 1320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1303 | 1320 | - | - |
| Coils | Coil | Coil | 1620 | 1621 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16260.3 | - | 0 |
| RefSeq | XP_044326518.1 | receptor like protein kinase S.2-like [Triticum aestivum] | 0 |
| Q9SA25 | Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana OX=3702 GN=WAKL8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0D9VUN2 | Protein kinase domain-containing protein OS=Leersia perrieri OX=77586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | CH04.1869, CH05.2817 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0375270, gene-QOZ80_9AG0685500 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0325550.1.CDS1 |
| Poaceae | Oryza coarctata | 1 | Oco22G008390 |
| Poaceae | Oryza sativa | 8 | LOC_Os10g02360.1, LOC_Os10g05250.1, LOC_Os10g05400.1 ... |
| Poaceae | Paspalum vaginatum | 13 | gene-BS78_05G166100, gene-BS78_05G166500, gene-BS78_K038600 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0600798 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr01G028150, Chr07G016140, Chr16G005860, Chr16G005880 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G153000, Tel7E01G297400 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC2BG007840, gene_TRIDC3AG072500 ... |
| Poaceae | Triticum aestivum | 5 | TraesCS2B02G075200.1, TraesCS3B02G579200.1.cds1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb114030_P001, Zm00001eb114060_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-44241 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g18068, Zma_g18069 |