Basic Information
Locus ID:
Pt_Chr0600559
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 13307754 | 13310054 | + | Pt_Chr0600559 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 85,818.06 Da | 44.74 | 62.23 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 65 | 118 | 3.29447E-16 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 537 | 743 | 1.0E-65 | IPR024593 |
| Pfam | PF00226 | DnaJ domain | 65 | 125 | 3.9E-16 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 56 | 122 | 5.76E-18 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 52 | 150 | 5.3E-17 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 64 | 121 | 1.0E-17 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 65 | 129 | 14.728089 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 67 | 85 | 1.7E-7 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 101 | 121 | 1.7E-7 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 85 | 100 | 1.7E-7 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 380 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 342 | - | - |
| Coils | Coil | Coil | 423 | 443 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_051227857.1 | uncharacterized protein LOC127345423 [Lolium perenne] | 0 |
| O13633 | Uncharacterized J domain-containing protein C17A3.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pi041 PE=1 SV=1 | 0 | |
| TrEMBL | M8B7E2 | Chaperone protein dnaJ OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology