Basic Information
Locus ID:
Pt_Chr0600381
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
BTB POZ and MATH domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 8331779 | 8332777 | + | Pt_Chr0600381 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 36,626.48 Da | 28.62 | 90.27 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 23 | 134 | 6.02213E-10 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 156 | 267 | 2.5E-22 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 24 | 140 | 2.94E-12 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 144 | 267 | 1.88E-25 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 139 | 298 | 1.2E-42 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 9 | 138 | 1.9E-11 | IPR008974 |
| SMART | SM00225 | BTB_4 | 163 | 269 | 8.9E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 163 | 232 | 15.886822 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 1 | 134 | 8.628971 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_051211668.1 | BTB/POZ and MATH domain-containing protein 1-like [Lolium perenne] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4V6D5R0 | BTB domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_6G222500v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology