halophFGD

Basic Information

Locus ID: Pt_Chr0600173

Species & Taxonomic ID: Puccinellia tenuiflora & 240906

Genome Assembly: GCA_012064385.1

Description: Protein tyrosine kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr06	4026467	4027252	+	Pt_Chr0600173

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
11.14	29,190.42 Da	60.23	89.27	-0.28

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	35	87	7.8E-7	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	174	243	1.63E-6	IPR011009
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	32	88	9.66E-11	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	157	261	4.4E-8	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	18	98	2.1E-10	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity)

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G39180.1	CRINKLY4 related 2.
RefSeq	XP_047061252.1	probable serine/threonine-protein kinase PBL25 [Lolium rigidum]
Swiss-Prot	O80963	Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana OX=3702 GN=CCR2 PE=1 SV=1
TrEMBL	A0A0Q3L2T4	Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_4g07930v3 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0101843, Pt_Chr0600173