Basic Information
Locus ID:
Pt_Chr0506095
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 187972800 | 187991886 | + | Pt_Chr0506095 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 194,494.91 Da | 44.75 | 80.35 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14133 | PKc_DYRK_like | 1430 | 1669 | 1.88219E-131 | - |
| CDD | cd00051 | EFh | 743 | 805 | 3.12316E-18 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 365 | 623 | 1.75749E-123 | - |
| Pfam | PF13499 | EF-hand domain pair | 742 | 805 | 1.8E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 670 | 730 | 4.5E-8 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 124 | 280 | 8.7E-38 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 366 | 624 | 2.4E-71 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 1430 | 1644 | 1.2E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 121 | 280 | 1.28E-44 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 364 | 625 | 5.53E-83 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1418 | 1685 | 1.17E-68 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 648 | 817 | 9.88E-43 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 633 | 808 | 4.5E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1484 | 1680 | 1.4E-82 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 452 | 632 | 4.2E-60 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 117 | 300 | 9.6E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 368 | 451 | 6.4E-23 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1425 | 1511 | 1.4E-82 | - |
| SMART | SM00220 | serkin_6 | 1430 | 1723 | 3.4E-50 | IPR000719 |
| SMART | SM00220 | serkin_6 | 366 | 624 | 1.3E-92 | IPR000719 |
| SMART | SM00054 | efh_1 | 671 | 699 | 3.4E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 124 | 359 | 2.2E-22 | IPR000719 |
| SMART | SM00054 | efh_1 | 779 | 807 | 6.8E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 707 | 735 | 1.5 | IPR002048 |
| SMART | SM00054 | efh_1 | 743 | 771 | 4.8E-4 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1430 | 1756 | 32.272881 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 775 | 810 | 14.792358 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 124 | 372 | 23.241255 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 366 | 624 | 46.19487 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 667 | 702 | 16.019756 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 739 | 774 | 13.676544 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 486 | 498 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 788 | 800 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1556 | 1568 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 680 | 692 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 372 | 395 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 752 | 764 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 851 | 877 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1152 | 1199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 900 | 915 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 851 | 923 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1152 | 1171 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_052156456.1 | uncharacterized protein LOC127774245 [Oryza glaberrima] | 0 |
| Q6I5I8 | Calcium-dependent protein kinase 16 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK16 PE=3 SV=1 | 0 | |
| TrEMBL | A0A1E5UVL2 | Calcium-dependent protein kinase 13 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0022063 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Pt_Chr0506095.