HalophFGD

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Basic Information
Locus ID: Pt_Chr0505593
Species & Taxonomic ID: Puccinellia tenuiflora & 240906
Genome Assembly: GCA_012064385.1
Description: F-box-like
Maps and Mapping Data
Chromosome Start End Strand ID
Chr05 175271369 175271617 + Pt_Chr0505593
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.82 9,381.82 Da 64.87 90.37 0.07
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 8 50 7.4E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 5 57 2.22E-9 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044981302.1 uncharacterized protein LOC123448463 [Hordeum vulgare subsp. vulgare] 0
TrEMBL I1HVM8 F-box domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_2g62093v3 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Puccinellia tenuiflora 4 Pt_Chr0101270, Pt_Chr0404261, Pt_Chr0505593, Pt_Chr0505659
Poaceae Thinopyrum elongatum 1 Tel7E01G967600
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.