Basic Information
Locus ID:
Pt_Chr0504872
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 155609902 | 155617648 | - | Pt_Chr0504872 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 119,112.15 Da | 54.91 | 71.08 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 153 | 408 | 4.22889E-127 | - |
| Pfam | PF00069 | Protein kinase domain | 154 | 408 | 4.3E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 150 | 452 | 4.99E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 236 | 467 | 3.6E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 140 | 233 | 1.8E-23 | - |
| SMART | SM00220 | serkin_6 | 154 | 408 | 3.5E-85 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 154 | 408 | 46.138336 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 160 | 183 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 275 | 287 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 555 | 595 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 842 | 861 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 86 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 805 | 830 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 618 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 876 | 901 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 553 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 595 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44200.1 | NIMA (never in mitosis, gene A)-related 6. Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules. | 0 |
| RefSeq | XP_047095138.1 | serine/threonine-protein kinase Nek4-like [Lolium rigidum] | 0 |
| Q60DG4 | Serine/threonine-protein kinase Nek4 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A452Z7L6 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology