Basic Information
Locus ID:
Pt_Chr0504790
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 152845806 | 152846995 | - | Pt_Chr0504790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.29 | 45,365.63 Da | 39.21 | 84.17 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 211 | 325 | 7.2E-7 | IPR013187 |
| Pfam | PF00646 | F-box domain | 16 | 47 | 2.9E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 49 | 3.43E-5 | IPR036047 |
| SUPERFAMILY | SSF63825 | YWTD domain | 86 | 277 | 7.06E-6 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 11 | 68 | 1.5E-6 | - |
| SMART | SM00256 | fbox_2 | 14 | 54 | 1.8E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 115 | 327 | 3.6E-16 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051190383.1 | F-box protein At3g07870-like [Lolium perenne] | 0 |
| TrEMBL | N1R2N6 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology