Basic Information
Locus ID:
Pt_Chr0504550
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 145212059 | 145220650 | - | Pt_Chr0504550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 95,365.93 Da | 43.49 | 94.10 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 546 | 812 | 5.42968E-89 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 69 | 1.1E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 542 | 807 | 6.3E-48 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 303 | 4.13E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 526 | 830 | 2.19E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 324 | 1.1E-58 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 511 | 615 | 4.8E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 616 | 823 | 4.8E-57 | - |
| SMART | SM00220 | serkin_6 | 540 | 812 | 2.0E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 540 | 813 | 38.407036 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 546 | 568 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 660 | 672 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.2 | - | 0 |
| RefSeq | XP_051205235.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Lolium perenne] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8R7P2S9 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology