Basic Information
Locus ID:
Pt_Chr0504463
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 143482562 | 143487989 | + | Pt_Chr0504463 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 92,210.75 Da | 32.16 | 86.39 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 67 | 1.1E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 692 | 793 | 4.7E-7 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 391 | 2.24E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 624 | 800 | 3.51E-26 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 381 | 4.2E-35 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 692 | 806 | 1.3E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 605 | 691 | 1.2E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 189 | 1.4E-38 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 268 | 290 | 7.87367 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 640 | 662 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_047094359.1 | leucine-rich repeat receptor protein kinase HPCA1-like [Lolium rigidum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | M0WQQ4 | Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology