Basic Information
Locus ID:
Pt_Chr0504391
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 141891266 | 141894220 | + | Pt_Chr0504391 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 73,336.48 Da | 45.96 | 90.70 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 360 | 624 | 3.69768E-92 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 25 | 121 | 2.3E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 159 | 240 | 9.1E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 357 | 623 | 2.6E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 624 | 1.12E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 137 | 244 | 1.6E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 311 | 429 | 6.9E-38 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 17 | 122 | 2.7E-13 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 430 | 636 | 1.4E-57 | - |
| SMART | SM00220 | serkin_6 | 354 | 629 | 5.5E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 354 | 639 | 39.48122 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 136 | 244 | 16.678946 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 15 | 125 | 13.202938 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 475 | 487 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_037419099.1 | uncharacterized protein LOC119283800 [Triticum dicoccoides] | 0 |
| Q0D5R2 | Cysteine-rich receptor-like protein kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK10 PE=2 SV=1 | 0 | |
| TrEMBL | F2DH48 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology