Basic Information
Locus ID:
Pt_Chr0504390
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 141881802 | 141884528 | - | Pt_Chr0504390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 70,250.91 Da | 42.77 | 94.95 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 331 | 597 | 5.79163E-93 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 24 | 107 | 9.3E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 329 | 597 | 1.4E-46 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 156 | 236 | 4.1E-8 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 308 | 629 | 3.1E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 131 | 240 | 7.6E-16 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 401 | 610 | 2.0E-59 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 20 | 111 | 1.6E-11 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 288 | 400 | 1.9E-37 | - |
| SMART | SM00220 | serkin_6 | 325 | 602 | 7.8E-33 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 132 | 240 | 15.475015 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 8 | 113 | 11.501143 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 325 | 603 | 37.99715 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 446 | 458 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 331 | 353 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_047055644.1 | cysteine-rich receptor-like protein kinase 10 [Lolium rigidum] | 0 |
| Q0D5R2 | Cysteine-rich receptor-like protein kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6N481 | Cysteine-rich receptor-like protein kinase 25 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology