Basic Information
Locus ID:
Pt_Chr0504166
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 136216677 | 136222110 | - | Pt_Chr0504166 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 101,131.05 Da | 112.93 | 55.78 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 716 | 902 | 8.5E-20 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 727 | 903 | 1.31E-36 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 721 | 910 | 1.2E-47 | - |
| SMART | SM00220 | serkin_6 | 659 | 862 | 1.9E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 629 | 907 | 13.658404 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 756 | 768 | - | IPR008271 |
| PRINTS | PR01218 | Pistil-specific extensin-like signature | 40 | 51 | 1.4E-6 | IPR003882 |
| PRINTS | PR01218 | Pistil-specific extensin-like signature | 286 | 304 | 1.4E-6 | IPR003882 |
| PRINTS | PR01218 | Pistil-specific extensin-like signature | 388 | 409 | 1.4E-6 | IPR003882 |
| PRINTS | PR01218 | Pistil-specific extensin-like signature | 252 | 275 | 1.4E-6 | IPR003882 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 698 | 712 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 605 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 642 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 677 | 712 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 962 | 1003 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 606 | 621 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24550.1 | proline extensin-like receptor kinase 1. encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection. | 0 |
| RefSeq | XP_047044168.1 | proline-rich receptor-like protein kinase PERK1 [Lolium rigidum] | 0 |
| Q9LV48 | Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6A0G2 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Pt_Chr0504166.