Basic Information
Locus ID:
Pt_Chr0504113
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 134715524 | 134719699 | + | Pt_Chr0504113 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 108,916.31 Da | 43.23 | 100.39 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 681 | 974 | 2.84797E-85 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 70 | 1.8E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 678 | 969 | 4.1E-40 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 271 | 329 | 1.5E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 671 | 973 | 1.31E-69 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 344 | 575 | 6.54E-38 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 78 | 405 | 8.63E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 318 | 596 | 4.4E-68 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 314 | 1.1E-68 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 665 | 759 | 2.4E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 760 | 995 | 3.8E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 530 | 554 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 292 | 315 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 145 | 6.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 219 | 243 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 316 | 340 | 33.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 675 | 998 | 2.9E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 482 | 506 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 194 | 370.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 675 | 998 | 35.891186 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 821 | 833 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 681 | 709 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_051209390.1 | receptor-like protein kinase 5 [Lolium perenne] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Z2Z9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology