Basic Information
Locus ID:
Pt_Chr0503804
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
PAP2 superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 126940074 | 126947357 | + | Pt_Chr0503804 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 77,689.67 Da | 36.58 | 92.91 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03390 | PAP2_containing_1_like | 512 | 683 | 1.45314E-78 | - |
| CDD | cd03390 | PAP2_containing_1_like | 95 | 249 | 9.0233E-66 | - |
| Pfam | PF01569 | PAP2 superfamily | 95 | 250 | 1.6E-28 | IPR000326 |
| Pfam | PF01569 | PAP2 superfamily | 539 | 684 | 1.9E-31 | IPR000326 |
| SUPERFAMILY | SSF48317 | Acid phosphatase/Vanadium-dependent haloperoxidase | 29 | 252 | 6.54E-33 | IPR036938 |
| SUPERFAMILY | SSF48317 | Acid phosphatase/Vanadium-dependent haloperoxidase | 471 | 688 | 8.37E-37 | IPR036938 |
| Gene3D | G3DSA:1.20.144.10 | Phosphatidic acid phosphatase type 2/haloperoxidase | 35 | 259 | 1.9E-36 | - |
| Gene3D | G3DSA:1.20.144.10 | Phosphatidic acid phosphatase type 2/haloperoxidase | 465 | 701 | 1.3E-38 | - |
| SMART | SM00014 | acid_phosph_2 | 91 | 246 | 6.7E-23 | IPR000326 |
| SMART | SM00014 | acid_phosph_2 | 537 | 680 | 4.6E-21 | IPR000326 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 311 | 346 | - | - |
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15080.1 | lipid phosphate phosphatase 2. Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals. | 0 |
| RefSeq | XP_020098188.1 | uncharacterized protein LOC109716956 isoform X3 [Ananas comosus] | 0 |
| Q9XI60 | Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana OX=3702 GN=LPP2 PE=2 SV=1 | 0 | |
| TrEMBL | B9G0I9 | AcidPPc domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_27038 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology