Basic Information
Locus ID:
Pt_Chr0503720
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
PAP2 superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 124815696 | 124829679 | + | Pt_Chr0503720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 106,865.30 Da | 38.32 | 93.92 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03390 | PAP2_containing_1_like | 370 | 538 | 2.9283E-69 | - |
| CDD | cd03390 | PAP2_containing_1_like | 771 | 931 | 3.76422E-72 | - |
| CDD | cd03390 | PAP2_containing_1_like | 64 | 219 | 3.84759E-57 | - |
| Pfam | PF01569 | PAP2 superfamily | 125 | 220 | 2.1E-19 | IPR000326 |
| Pfam | PF01569 | PAP2 superfamily | 412 | 539 | 1.1E-24 | IPR000326 |
| Pfam | PF01569 | PAP2 superfamily | 798 | 931 | 3.7E-28 | IPR000326 |
| SUPERFAMILY | SSF48317 | Acid phosphatase/Vanadium-dependent haloperoxidase | 29 | 224 | 2.22E-24 | IPR036938 |
| SUPERFAMILY | SSF48317 | Acid phosphatase/Vanadium-dependent haloperoxidase | 731 | 943 | 1.7E-33 | IPR036938 |
| SUPERFAMILY | SSF48317 | Acid phosphatase/Vanadium-dependent haloperoxidase | 335 | 541 | 2.35E-28 | IPR036938 |
| Gene3D | G3DSA:1.20.144.10 | Phosphatidic acid phosphatase type 2/haloperoxidase | 723 | 955 | 2.0E-35 | - |
| Gene3D | G3DSA:1.20.144.10 | Phosphatidic acid phosphatase type 2/haloperoxidase | 332 | 551 | 4.7E-28 | - |
| Gene3D | G3DSA:1.20.144.10 | Phosphatidic acid phosphatase type 2/haloperoxidase | 99 | 229 | 1.5E-24 | - |
| SMART | SM00014 | acid_phosph_2 | 79 | 216 | 8.0E-14 | IPR000326 |
| SMART | SM00014 | acid_phosph_2 | 796 | 939 | 1.2E-14 | IPR000326 |
| SMART | SM00014 | acid_phosph_2 | 391 | 535 | 1.2E-18 | IPR000326 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 600 | 626 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 600 | 667 | - | - |
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15080.1 | lipid phosphate phosphatase 2. Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals. | 0 |
| RefSeq | XP_020098181.1 | uncharacterized protein LOC109716956 isoform X2 [Ananas comosus] | 0 |
| Q9XI60 | Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana OX=3702 GN=LPP2 PE=2 SV=1 | 0 | |
| TrEMBL | B9G0I9 | AcidPPc domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_27038 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology