Basic Information
Locus ID:
Pt_Chr0503713
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
to Saccharomyces cerevisiae GCN2 (YDR283C)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 124636618 | 124646945 | - | Pt_Chr0503713 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.50 | 74,774.37 Da | 54.33 | 61.75 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 391 | 675 | 7.4E-34 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 676 | 1.73E-46 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 506 | 681 | 2.3E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 385 | 502 | 8.4E-9 | - |
| SMART | SM00220 | serkin_6 | 391 | 677 | 1.0E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 391 | 681 | 32.640366 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 542 | 554 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 605 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 254 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59410.5 | - | 0 |
| RefSeq | XP_051218635.1 | uncharacterized protein LOC127335941 [Lolium perenne] | 0 |
| Q9LX30 | eIF-2-alpha kinase GCN2 OS=Arabidopsis thaliana OX=3702 GN=GCN2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0E0DH73 | Protein kinase domain-containing protein OS=Oryza meridionalis OX=40149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_4BG0338110 |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_002097, gene-QYE76_036350, gene-QYE76_036353 ... |
| Poaceae | Oryza sativa | 2 | LOC_Os03g40400.1, LOC_Os04g47570.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0503713 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC3BG052320, gene_TRIDC6AG022050 ... |
| Poaceae | Triticum aestivum | 2 | TraesCS7B02G255500.3, TraesCS7D02G470200.1 |
| Salicaceae | Populus euphratica | 1 | populus_peu06054 |