Basic Information
Locus ID:
Pt_Chr0502292
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 68567131 | 68571102 | + | Pt_Chr0502292 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 75,240.51 Da | 34.52 | 88.81 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 419 | 678 | 4.26485E-86 | - |
| CDD | cd00054 | EGF_CA | 305 | 337 | 7.69225E-7 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 33 | 75 | 4.6E-8 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 416 | 676 | 2.1E-42 | IPR000719 |
| Pfam | PF07645 | Calcium-binding EGF domain | 306 | 341 | 2.1E-6 | IPR001881 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 411 | 681 | 4.24E-66 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 305 | 341 | 1.27E-7 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 252 | 346 | 3.1E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 394 | 487 | 7.3E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 488 | 686 | 1.3E-51 | - |
| SMART | SM00181 | egf_5 | 255 | 304 | 20.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 305 | 347 | 7.2E-9 | IPR001881 |
| SMART | SM00181 | egf_5 | 308 | 347 | 0.0027 | IPR000742 |
| SMART | SM00179 | egfca_6 | 252 | 304 | 1.2 | IPR001881 |
| SMART | SM00220 | serkin_6 | 413 | 679 | 2.1E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 413 | 687 | 33.686283 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 305 | 342 | 10.24262 | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 533 | 545 | - | IPR008271 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 321 | 332 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 419 | 441 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 305 | 330 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_051226343.1 | wall-associated receptor kinase 2-like [Lolium perenne] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5ZNS3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology