Basic Information
Locus ID:
Pt_Chr0502284
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 68404758 | 68408220 | + | Pt_Chr0502284 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 61,168.24 Da | 37.16 | 86.47 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 168 | 200 | 3.13458E-7 | - |
| Pfam | PF00069 | Protein kinase domain | 279 | 539 | 9.4E-44 | IPR000719 |
| Pfam | PF07645 | Calcium-binding EGF domain | 169 | 204 | 1.6E-6 | IPR001881 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 168 | 204 | 7.49E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 272 | 544 | 2.6E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 257 | 350 | 4.1E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 351 | 549 | 5.5E-52 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 115 | 209 | 7.4E-12 | - |
| SMART | SM00220 | serkin_6 | 276 | 542 | 1.4E-28 | IPR000719 |
| SMART | SM00181 | egf_5 | 171 | 210 | 0.0027 | IPR000742 |
| SMART | SM00181 | egf_5 | 118 | 167 | 11.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 168 | 210 | 7.2E-9 | IPR001881 |
| SMART | SM00179 | egfca_6 | 115 | 167 | 0.84 | IPR001881 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 168 | 205 | 10.24262 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 276 | 544 | 34.576725 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 282 | 304 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 168 | 193 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 184 | 195 | - | IPR000152 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 396 | 408 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_047093593.1 | wall-associated receptor kinase 2-like [Lolium rigidum] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | M8CHL9 | Wall-associated receptor kinase 2 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology