Basic Information
Locus ID:
Pt_Chr0502200
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
F-box domain containing protein, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 65819699 | 65821211 | + | Pt_Chr0502200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 44,160.20 Da | 46.67 | 105.38 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 23 | 59 | 3.1E-7 | IPR001810 |
| SUPERFAMILY | SSF52058 | L domain-like | 118 | 244 | 3.2E-5 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 67 | 1.02E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 21 | 66 | 3.2E-7 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 21 | 68 | 10.186324 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22280.2 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_044379120.1 | putative FBD-associated F-box protein At5g56440 isoform X1 [Triticum aestivum] | 0 |
| Q3E7K7 | F-box protein At4g22280 OS=Arabidopsis thaliana OX=3702 GN=At4g22280 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KB27 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology