Basic Information
Locus ID:
Pt_Chr0502129
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
D-arabinono-1,4-lactone oxidase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 63759130 | 63788604 | - | Pt_Chr0502129 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 250,479.16 Da | 39.99 | 83.83 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03053 | GST_N_Phi | 801 | 876 | 8.0685E-36 | - |
| CDD | cd03187 | GST_C_Phi | 678 | 793 | 2.31076E-54 | IPR034347 |
| CDD | cd03053 | GST_N_Phi | 590 | 665 | 4.86888E-36 | - |
| CDD | cd03187 | GST_C_Phi | 891 | 1009 | 6.15127E-50 | IPR034347 |
| Pfam | PF00043 | Glutathione S-transferase, C-terminal domain | 908 | 1003 | 1.0E-14 | IPR004046 |
| Pfam | PF04030 | D-arabinono-1,4-lactone oxidase | 415 | 514 | 2.9E-8 | IPR007173 |
| Pfam | PF04030 | D-arabinono-1,4-lactone oxidase | 1516 | 1623 | 9.3E-10 | IPR007173 |
| Pfam | PF00043 | Glutathione S-transferase, C-terminal domain | 701 | 789 | 5.6E-17 | IPR004046 |
| Pfam | PF01565 | FAD binding domain | 1152 | 1284 | 2.4E-18 | IPR006094 |
| Pfam | PF02798 | Glutathione S-transferase, N-terminal domain | 801 | 875 | 3.2E-16 | IPR004045 |
| Pfam | PF02798 | Glutathione S-transferase, N-terminal domain | 590 | 664 | 4.1E-20 | IPR004045 |
| Pfam | PF04030 | D-arabinono-1,4-lactone oxidase | 2131 | 2234 | 1.5E-9 | IPR007173 |
| Pfam | PF01565 | FAD binding domain | 65 | 197 | 2.8E-17 | IPR006094 |
| Pfam | PF01565 | FAD binding domain | 1771 | 1903 | 2.4E-18 | IPR006094 |
| SUPERFAMILY | SSF47616 | GST C-terminal domain-like | 676 | 793 | 4.37E-29 | IPR036282 |
| SUPERFAMILY | SSF56176 | FAD-binding/transporter-associated domain-like | 1759 | 1945 | 2.85E-33 | IPR036318 |
| SUPERFAMILY | SSF56176 | FAD-binding/transporter-associated domain-like | 52 | 239 | 2.43E-30 | IPR036318 |
| SUPERFAMILY | SSF56176 | FAD-binding/transporter-associated domain-like | 1140 | 1326 | 2.85E-33 | IPR036318 |
| SUPERFAMILY | SSF47616 | GST C-terminal domain-like | 888 | 1008 | 1.34E-26 | IPR036282 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 802 | 880 | 9.31E-19 | IPR036249 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 590 | 668 | 2.95E-22 | IPR036249 |
| Gene3D | G3DSA:3.30.70.2520 | - | 2105 | 2198 | 3.3E-7 | - |
| Gene3D | G3DSA:3.30.465.10 | - | 1207 | 1326 | 3.1E-31 | IPR016169 |
| Gene3D | G3DSA:3.30.465.10 | - | 1826 | 1945 | 3.1E-31 | IPR016169 |
| Gene3D | G3DSA:1.20.1050.10 | - | 675 | 794 | 1.4E-43 | - |
| Gene3D | G3DSA:3.30.70.2520 | - | 379 | 478 | 7.3E-5 | - |
| Gene3D | G3DSA:3.30.465.10 | - | 119 | 239 | 1.3E-29 | IPR016169 |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 590 | 671 | 2.2E-25 | - |
| Gene3D | G3DSA:3.30.70.2520 | - | 1486 | 1587 | 7.9E-6 | - |
| Gene3D | G3DSA:1.20.1050.10 | - | 886 | 1009 | 2.4E-42 | - |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 801 | 884 | 3.8E-23 | - |
| TIGRFAM | TIGR01677 | pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase | 31 | 563 | 4.4E-206 | IPR010030 |
| TIGRFAM | TIGR01677 | pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase | 1737 | 2284 | 1.2E-227 | IPR010030 |
| TIGRFAM | TIGR01677 | pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase | 1118 | 1673 | 1.5E-231 | IPR010030 |
| ProSiteProfiles | PS50405 | Soluble glutathione S-transferase C-terminal domain profile. | 676 | 812 | 23.183796 | IPR010987 |
| ProSiteProfiles | PS50405 | Soluble glutathione S-transferase C-terminal domain profile. | 889 | 1030 | 20.959957 | IPR010987 |
| ProSiteProfiles | PS51387 | PCMH-type FAD-binding domain profile. | 1147 | 1327 | 19.848457 | IPR016166 |
| ProSiteProfiles | PS51387 | PCMH-type FAD-binding domain profile. | 60 | 240 | 18.350315 | IPR016166 |
| ProSiteProfiles | PS50404 | Soluble glutathione S-transferase N-terminal domain profile. | 800 | 881 | 21.702673 | IPR004045 |
| ProSiteProfiles | PS50404 | Soluble glutathione S-transferase N-terminal domain profile. | 589 | 670 | 25.935774 | IPR004045 |
| ProSiteProfiles | PS51387 | PCMH-type FAD-binding domain profile. | 1766 | 1946 | 19.848457 | IPR016166 |
| SFLD | SFLDG01154 | Main.5: Phi-like | 590 | 793 | 0.0 | - |
| SFLD | SFLDG01154 | Main.5: Phi-like | 801 | 1010 | 0.0 | - |
| SFLD | SFLDS00019 | Glutathione Transferase (cytosolic) | 590 | 793 | 0.0 | IPR040079 |
| SFLD | SFLDS00019 | Glutathione Transferase (cytosolic) | 801 | 1010 | 0.0 | IPR040079 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46750.1 | D-arabinono-1,4-lactone oxidase family protein. | 0 |
| RefSeq | XP_044956430.1 | probable L-gulonolactone oxidase 4 [Hordeum vulgare subsp. vulgare] | 0 |
| Q6NQ66 | L-gulonolactone oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=GULLO2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D9YLK8 | L-gulonolactone oxidase OS=Oryza glumipatula OX=40148 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology