Basic Information
Locus ID:
Pt_Chr0501977
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 58087553 | 58095072 | - | Pt_Chr0501977 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 132,400.31 Da | 45.66 | 83.61 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 869 | 997 | 2.43247E-15 | IPR002083 |
| CDD | cd00121 | MATH | 549 | 659 | 1.06505E-11 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 1013 | 1127 | 3.63106E-44 | - |
| CDD | cd00121 | MATH | 195 | 316 | 1.5572E-13 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 337 | 445 | 2.5E-24 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 673 | 781 | 8.2E-23 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 1019 | 1127 | 7.9E-26 | IPR000210 |
| Pfam | PF00917 | MATH domain | 202 | 312 | 0.0068 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 869 | 1006 | 4.74E-20 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 1005 | 1129 | 1.73E-32 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 192 | 321 | 1.44E-18 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 324 | 447 | 1.73E-31 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 542 | 665 | 8.18E-15 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 669 | 782 | 1.54E-28 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1000 | 1160 | 3.5E-52 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 662 | 813 | 1.8E-46 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 321 | 478 | 1.2E-50 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 868 | 999 | 5.9E-18 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 536 | 661 | 1.3E-11 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 188 | 320 | 2.4E-15 | IPR008974 |
| SMART | SM00225 | BTB_4 | 345 | 449 | 3.5E-22 | IPR000210 |
| SMART | SM00225 | BTB_4 | 680 | 784 | 1.1E-19 | IPR000210 |
| SMART | SM00225 | BTB_4 | 1027 | 1131 | 1.2E-24 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 680 | 747 | 18.802982 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 866 | 997 | 13.487177 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 185 | 316 | 11.79959 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 535 | 659 | 8.628971 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 345 | 412 | 19.195942 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 1027 | 1094 | 19.216623 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 50 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_047042746.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium rigidum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0CED5 | BTB domain-containing protein OS=Oryza meridionalis OX=40149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology