Basic Information
Locus ID:
Pt_Chr0501975
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 58060065 | 58069853 | - | Pt_Chr0501975 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 61,371.87 Da | 49.08 | 85.39 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 242 | 346 | 0.00106714 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 77 | 112 | 6.9E-6 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 367 | 475 | 7.9E-25 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 357 | 477 | 8.24E-30 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 64 | 139 | 9.42E-13 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 58 | 115 | 1.3E-12 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 479 | 549 | 3.4E-16 | - |
| Gene3D | G3DSA:6.10.250.3030 | - | 116 | 175 | 5.0E-6 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 352 | 474 | 6.2E-35 | IPR011333 |
| SMART | SM00225 | BTB_4 | 375 | 479 | 4.6E-21 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 375 | 442 | 18.947758 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 85 | 114 | 10.447455 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 209 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_051230518.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium perenne] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7JXA1 | BTB domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology