Basic Information
Locus ID:
Pt_Chr0501973
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 58048550 | 58053524 | + | Pt_Chr0501973 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.45 | 152,070.88 Da | 41.23 | 79.96 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 760 | 1008 | 4.35367E-127 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1153 | 1417 | 3.0E-124 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 791 | 927 | 1.0E-21 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 785 | 939 | 1.36E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 761 | 1011 | 5.6E-56 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 670 | 1422 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 788 | 1017 | 28.737249 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 560 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 485 | 632 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 277 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1066 | 1087 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 390 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 506 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 613 | 632 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 592 | 612 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 418 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 269 | - | - |
| Coils | Coil | Coil | 1111 | 1131 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_047096570.1 | translocase of chloroplast 101, chloroplastic-like [Lolium rigidum] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YTX3 | AIG1-type G domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology