Basic Information
Locus ID:
Pt_Chr0501783
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 51903983 | 51906400 | - | Pt_Chr0501783 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.14 | 51,481.71 Da | 46.87 | 90.02 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 55 | 91 | 4.7E-7 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 269 | 353 | 1.5E-4 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 44 | 101 | 9.55E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 52 | 93 | 7.7E-9 | - |
| SMART | SM00256 | fbox_2 | 55 | 95 | 4.1E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 162 | 384 | 9.1E-21 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 49 | 94 | 9.603447 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G47790.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_037461116.1 | putative F-box protein At4g09190 [Triticum dicoccoides] | 0 |
| Q9FZF8 | Putative F-box protein At1g47790 OS=Arabidopsis thaliana OX=3702 GN=At1g47790 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6IPB5 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology