Basic Information
Locus ID:
Pt_Chr0501546
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 44325678 | 44338687 | - | Pt_Chr0501546 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.85 | 88,520.09 Da | 52.48 | 73.66 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14016 | STKc_CK1 | 153 | 468 | 9.90431E-123 | - |
| Pfam | PF00069 | Protein kinase domain | 279 | 426 | 2.8E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 152 | 474 | 2.83E-51 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 146 | 254 | 1.0E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 260 | 513 | 5.0E-70 | - |
| SMART | SM00220 | serkin_6 | 153 | 487 | 2.4E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 153 | 478 | 22.068134 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 319 | 331 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25760.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_039799477.1 | casein kinase 1-like protein HD16 isoform X1 [Panicum virgatum] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | M7ZPU8 | Casein kinase I-like protein 2 OS=Triticum urartu OX=4572 GN=TRIUR3_35040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology