Basic Information
Locus ID:
Pt_Chr0501495
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 42697743 | 42699802 | - | Pt_Chr0501495 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 53,296.32 Da | 47.98 | 79.53 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 59 | 93 | 8.0E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 59 | 105 | 3.53E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 57 | 95 | 1.7E-7 | - |
| SMART | SM00256 | fbox_2 | 59 | 98 | 1.0E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 177 | 381 | 2.2E-19 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 53 | 98 | 9.868391 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G52320.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_051211142.1 | putative F-box/kelch-repeat protein At1g13200 [Lolium perenne] | 0 |
| Q9FT50 | Putative F-box protein At3g52320 OS=Arabidopsis thaliana OX=3702 GN=At3g52320 PE=4 SV=1 | 0 | |
| TrEMBL | A0A835EE14 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_043300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology