Basic Information
Locus ID:
Pt_Chr0501117
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 28645051 | 28648718 | - | Pt_Chr0501117 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 80,415.28 Da | 39.66 | 82.03 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 15 | 203 | 9.81311E-109 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 28 | 182 | 3.9E-13 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 185 | 694 | 2.0E-234 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 5 | 214 | 3.19E-73 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 544 | 665 | 4.97E-37 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 265 | 520 | 5.69E-108 | IPR020568 |
| Gene3D | G3DSA:3.30.230.80 | - | 264 | 432 | 1.8E-84 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 520 | 669 | 3.4E-65 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 3 | 229 | 8.9E-97 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 433 | 519 | 8.2E-41 | - |
| SMART | SM00387 | HKATPase_4 | 28 | 183 | 3.6E-7 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 1 | 700 | 2.1E-256 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 26 | 35 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 27 | 49 | 7.3E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 171 | 188 | 7.3E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 6 | 26 | 7.3E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 119 | 141 | 7.3E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 94 | 111 | 7.3E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 76 | 93 | 7.3E-84 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 189 | 207 | 7.3E-84 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 3 | 666 | 27.152758 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 250 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 672 | 700 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 250 | - | - |
| Coils | Coil | Coil | 524 | 544 | - | - |
| Coils | Coil | Coil | 229 | 259 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56030.1 | heat shock protein 81-2. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c. | 0 |
| RefSeq | XP_037434903.1 | heat shock protein 81-3-like [Triticum dicoccoides] | 0 |
| Q07078 | Heat shock protein 81-3 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP81-3 PE=1 SV=2 | 0 | |
| TrEMBL | F4Y595 | Heat shock protein 90 OS=Triticum aestivum OX=4565 GN=Hsp90.3-A1 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology