Basic Information
Locus ID:
Pt_Chr0501097
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 28288789 | 28289944 | + | Pt_Chr0501097 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 31,727.97 Da | 41.75 | 91.47 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 5 | 264 | 1.9E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 266 | 4.51E-57 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 275 | 2.1E-61 | - |
| SMART | SM00220 | serkin_6 | 4 | 264 | 8.6E-15 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 1 | 275 | 4.4E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 274 | 33.050251 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 119 | 131 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G48740.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_044450542.1 | uncharacterized protein LOC123182136 isoform X2 [Triticum aestivum] | 0 |
| C0LGV0 | Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana OX=3702 GN=At5g48740 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5ZY30 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_07G159300, gene-BS78_08G008800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0501084, Pt_Chr0501097 |