Basic Information
Locus ID:
Pt_Chr0501084
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 27997426 | 28007253 | + | Pt_Chr0501084 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.88 | 90,323.34 Da | 30.76 | 72.43 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 666 | 802 | 7.24301E-29 | IPR033734 |
| CDD | cd09612 | Jacalin | 497 | 630 | 8.05846E-29 | IPR033734 |
| CDD | cd09612 | Jacalin | 323 | 460 | 8.29638E-29 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 510 | 631 | 8.1E-19 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 687 | 803 | 2.6E-17 | IPR001229 |
| Pfam | PF00069 | Protein kinase domain | 18 | 293 | 3.2E-45 | IPR000719 |
| Pfam | PF01419 | Jacalin-like lectin domain | 337 | 461 | 5.4E-17 | IPR001229 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 295 | 3.96E-66 | IPR011009 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 310 | 461 | 8.37E-33 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 482 | 632 | 7.72E-36 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 653 | 803 | 7.33E-33 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 647 | 804 | 6.6E-37 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 305 | 460 | 3.2E-36 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 477 | 630 | 8.2E-39 | IPR036404 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 88 | 3.8E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 106 | 304 | 8.8E-49 | - |
| SMART | SM00915 | Jacalin_2 | 330 | 461 | 1.8E-9 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 673 | 805 | 2.9E-5 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 502 | 632 | 1.5E-7 | IPR001229 |
| SMART | SM00220 | serkin_6 | 17 | 302 | 2.2E-30 | IPR000719 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 655 | 805 | 27.038174 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 484 | 632 | 34.278915 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 312 | 461 | 31.202539 | IPR001229 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 17 | 302 | 37.17738 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 23 | 44 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 148 | 160 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11330.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_044450541.1 | putative proline-rich receptor-like protein kinase PERK6 isoform X1 [Triticum aestivum] | 0 |
| P83304 | Mannose/glucose-specific lectin (Fragment) OS=Parkia platycephala OX=185447 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5ZY30 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_07G159300, gene-BS78_08G008800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0501084, Pt_Chr0501097 |