Basic Information
Locus ID:
Pt_Chr0501016
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 25587021 | 25593728 | - | Pt_Chr0501016 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 105,843.41 Da | 36.39 | 84.76 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 302 | 335 | 3.08905E-7 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 29 | 77 | 1.7E-11 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 791 | 917 | 1.1E-21 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 416 | 676 | 6.2E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 393 | 688 | 1.04E-62 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 298 | 339 | 4.02E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 785 | 950 | 4.39E-33 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 784 | 951 | 3.8E-37 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 254 | 345 | 8.4E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 388 | 488 | 9.6E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 490 | 701 | 7.4E-46 | - |
| SMART | SM00181 | egf_5 | 305 | 346 | 0.15 | IPR000742 |
| SMART | SM00220 | serkin_6 | 413 | 680 | 9.5E-21 | IPR000719 |
| SMART | SM00181 | egf_5 | 254 | 301 | 4.9 | IPR000742 |
| SMART | SM00179 | egfca_6 | 302 | 346 | 1.2E-6 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 672 | 951 | 18.280222 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 413 | 681 | 32.894779 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 419 | 441 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 533 | 545 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 302 | 328 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 319 | 330 | - | IPR000152 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_020169696.1 | wall-associated receptor kinase 2-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453JGH8 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology