Basic Information
Locus ID:
Pt_Chr0501009
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 25430969 | 25440891 | - | Pt_Chr0501009 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 74,801.16 Da | 42.22 | 81.34 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 303 | 336 | 1.44866E-6 | - |
| Pfam | PF08488 | Wall-associated kinase | 175 | 267 | 1.8E-4 | IPR013695 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 418 | 491 | 2.0E-12 | IPR001245 |
| Pfam | PF07645 | Calcium-binding EGF domain | 304 | 341 | 1.6E-6 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 29 | 77 | 1.3E-11 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 417 | 593 | 2.4E-25 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 303 | 340 | 3.56E-6 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 256 | 346 | 2.5E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 389 | 487 | 1.2E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 488 | 604 | 1.2E-14 | - |
| SMART | SM00181 | egf_5 | 306 | 347 | 0.073 | IPR000742 |
| SMART | SM00181 | egf_5 | 256 | 302 | 3.6 | IPR000742 |
| SMART | SM00179 | egfca_6 | 303 | 347 | 1.8E-6 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 414 | 677 | 11.255625 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 303 | 329 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 420 | 442 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 320 | 331 | - | IPR000152 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_020169696.1 | wall-associated receptor kinase 2-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453JGH8 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology