Basic Information
Locus ID:
Pt_Chr0501007
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 25324613 | 25329707 | + | Pt_Chr0501007 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 83,717.20 Da | 40.77 | 83.73 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 318 | 351 | 7.76281E-8 | - |
| Pfam | PF00069 | Protein kinase domain | 432 | 692 | 1.2E-42 | IPR000719 |
| Pfam | PF07645 | Calcium-binding EGF domain | 319 | 356 | 3.1E-7 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 44 | 92 | 3.1E-12 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 413 | 696 | 2.7E-64 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 314 | 355 | 4.65E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 506 | 718 | 1.7E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 404 | 504 | 1.5E-24 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 271 | 361 | 7.4E-12 | - |
| SMART | SM00220 | serkin_6 | 429 | 696 | 1.6E-21 | IPR000719 |
| SMART | SM00181 | egf_5 | 321 | 362 | 0.0093 | IPR000742 |
| SMART | SM00179 | egfca_6 | 318 | 362 | 1.6E-7 | IPR001881 |
| SMART | SM00181 | egf_5 | 271 | 317 | 5.1 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 429 | 697 | 33.488407 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 318 | 353 | 8.935071 | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 318 | 344 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 549 | 561 | - | IPR008271 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 335 | 346 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 435 | 457 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 716 | 747 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 706 | 747 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_020169696.1 | wall-associated receptor kinase 2-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453JGH8 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology