Basic Information
Locus ID:
Pt_Chr0500814
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Short Name:
WNK3
Description:
Oxidative-stress-responsive kinase 1 C-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 20992530 | 20997439 | - | Pt_Chr0500814 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.65 | 53,480.34 Da | 48.74 | 76.54 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 38 | 134 | 7.8E-9 | IPR001245 |
| Pfam | PF12202 | Oxidative-stress-responsive kinase 1 C-terminal domain | 228 | 282 | 1.9E-5 | IPR024678 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 31 | 142 | 1.61E-13 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 224 | 318 | 5.1E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 18 | 120 | 5.0E-31 | - |
| SMART | SM00220 | serkin_6 | 35 | 171 | 0.0029 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 35 | 361 | 9.630214 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 343 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 345 | - | - |
| Coils | Coil | Coil | 417 | 444 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G48260.1 | with no lysine (K) kinase 3. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. | 0 |
| RefSeq | XP_051224144.1 | probable serine/threonine-protein kinase WNK2 [Lolium perenne] | 0 |
| Q65X23 | Probable serine/threonine-protein kinase WNK2 OS=Oryza sativa subsp. japonica OX=39947 GN=WNK2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6W3S0 | non-specific serine/threonine protein kinase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0500814, Pt_Chr0500912 |