Basic Information
Locus ID:
Pt_Chr0500622
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 15647808 | 15648776 | - | Pt_Chr0500622 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.06 | 37,759.87 Da | 51.70 | 72.89 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 8 | 41 | 1.9E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 6 | 86 | 1.21E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 6 | 43 | 1.0E-6 | - |
| SMART | SM00256 | fbox_2 | 8 | 50 | 9.1E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 90 | 272 | 8.2E-17 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 2 | 50 | 9.947874 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_051221763.1 | F-box protein At3g07870-like [Lolium perenne] | 0 |
| Q9SFC7 | F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6SE00 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology