Basic Information
Locus ID:
Pt_Chr0500386
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 9707825 | 9709051 | + | Pt_Chr0500386 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 47,320.72 Da | 49.84 | 88.28 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 25 | 62 | 1.1E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 21 | 78 | 1.44E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 20 | 64 | 8.8E-7 | - |
| SMART | SM00256 | fbox_2 | 24 | 65 | 0.0015 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 133 | 331 | 6.7E-19 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02030.1 | F-box family protein. | 0 |
| RefSeq | XP_044368305.1 | putative F-box protein At1g47790 [Triticum aestivum] | 0 |
| Q9ZPS1 | Putative F-box protein At2g02030 OS=Arabidopsis thaliana OX=3702 GN=At2g02030 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6ILX6 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology