Basic Information
Locus ID:
Pt_Chr0500301
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 7641882 | 7642985 | + | Pt_Chr0500301 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.77 | 42,310.20 Da | 42.98 | 75.04 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 13 | 45 | 5.8E-9 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 216 | 282 | 5.3E-6 | IPR013187 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 168 | 321 | 7.85E-7 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 46 | 6.41E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 10 | 61 | 9.1E-6 | - |
| SMART | SM00256 | fbox_2 | 11 | 52 | 5.0E-7 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 97 | 303 | 7.1E-29 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_051211947.1 | F-box protein At1g52495-like [Lolium perenne] | 0 |
| Q9SFC7 | F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6DM20 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology