Basic Information
Locus ID:
Pt_Chr0500292
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 7483379 | 7484496 | + | Pt_Chr0500292 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.78 | 39,927.45 Da | 53.02 | 70.43 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 13 | 44 | 3.2E-9 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 196 | 261 | 3.0E-5 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 45 | 8.76E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 12 | 47 | 2.5E-6 | - |
| SMART | SM00256 | fbox_2 | 11 | 52 | 2.4E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 179 | 285 | 6.4E-11 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_051211947.1 | F-box protein At1g52495-like [Lolium perenne] | 0 |
| Q9SFC7 | F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6DM20 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology