Basic Information
Locus ID:
Pt_Chr0500275
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 7116450 | 7121225 | - | Pt_Chr0500275 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 86,137.67 Da | 45.39 | 84.17 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 62 | 266 | 2.1E-45 | IPR000719 |
| Pfam | PF00092 | von Willebrand factor type A domain | 389 | 533 | 3.8E-8 | IPR002035 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 41 | 316 | 3.78E-66 | IPR011009 |
| SUPERFAMILY | SSF53300 | vWA-like | 375 | 540 | 8.34E-19 | IPR036465 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 32 | 133 | 6.2E-24 | - |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 388 | 540 | 3.9E-22 | IPR036465 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 154 | 336 | 2.7E-43 | - |
| SMART | SM00220 | serkin_6 | 61 | 320 | 9.2E-27 | IPR000719 |
| SMART | SM00327 | VWA_4 | 373 | 537 | 1.2E-6 | IPR002035 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 61 | 327 | 33.036118 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 197 | 209 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 67 | 89 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 48 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21410.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_044415777.1 | uncharacterized protein LOC123140106 [Triticum aestivum] | 0 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 0 | |
| TrEMBL | A0A3B5Z207 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology