halophFGD

Basic Information

Locus ID: Pt_Chr0500273

Species & Taxonomic ID: Puccinellia tenuiflora & 240906

Genome Assembly: GCA_012064385.1

Description: WD domain, G-beta repeat

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr05	6995094	7002342	-	Pt_Chr0500273

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.11	41,101.10 Da	51.54	81.15	-0.42

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	62	344	9.2E-46	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	50	350	4.99E-65	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	20	136	3.6E-24	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	154	362	5.1E-47	-
SMART	SM00220	serkin_6	61	344	6.6E-22	IPR000719
PIRSF	PIRSF000654	ILK	32	361	1.6E-26	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	61	363	33.389469	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	197	209	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	67	89	-	IPR017441
MobiDBLite	mobidb-lite	consensus disorder prediction	1	38	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	16	38	-	-
Coils	Coil	Coil	339	359	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G00960.1	Protein kinase superfamily protein.
RefSeq	XP_037482560.1	uncharacterized protein LOC119361473, partial [Triticum dicoccoides]
Swiss-Prot	O23082	Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2
TrEMBL	A0A3B5YTQ5	Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	16	AH02.601, AH04.1917, AH04.2063, AH04.984, AH04.986, BH04.535 ... BH04.1946, BH04.1947, BH04.904, BH04.934, CH03.3, CH04.1408, CH04.1624, CH04.2111, CH04.2290, CH04.2291
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_5AG0396410, gene-QOZ80_5BG0442950 ... gene-QOZ80_9AG0683790, gene-QOZ80_9AG0685340, gene-QOZ80_9BG0695800, gene-QOZ80_9BG0711440
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.1HG0008320.1, HORVU.MOREX.r3.2HG0098680.2 ... HORVU.MOREX.r3.2HG0098670.1.CDS1, HORVU.MOREX.r3.2HG0208840.1, HORVU.MOREX.r3.5HG0420370.1
Poaceae	Lolium multiflorum	16	gene-QYE76_003210, gene-QYE76_007483, gene-QYE76_007487 ... gene-QYE76_007511, gene-QYE76_007922, gene-QYE76_009318, gene-QYE76_009320, gene-QYE76_019664, gene-QYE76_019666, gene-QYE76_019668, gene-QYE76_019669, gene-QYE76_036521, gene-QYE76_036532, gene-QYE76_036739, gene-QYE76_040477, gene-QYE76_056771
Poaceae	Oryza coarctata	4	Oco09G005010, Oco21G003120, Oco22G003930, Oco22G003940
Poaceae	Oryza sativa	9	LOC_Os04g30030.1, LOC_Os04g30040.2, LOC_Os11g10640.1 ... LOC_Os11g10710.1, LOC_Os11g17380.1, LOC_Os11g39420.1, LOC_Os11g39450.1, LOC_Os11g39490.1, LOC_Os11g39530.1
Poaceae	Paspalum vaginatum	19	gene-BS78_05G059300, gene-BS78_05G121900, gene-BS78_K001200 ... gene-BS78_05G125100, gene-BS78_05G188700, gene-BS78_05G205700, gene-BS78_05G205900, gene-BS78_06G012700, gene-BS78_06G018400, gene-BS78_06G226600, gene-BS78_07G159200, gene-BS78_08G008700, gene-BS78_08G073500, gene-BS78_08G093200, gene-BS78_08G105000, gene-BS78_09G057500, gene-BS78_K312800, gene-BS78_K312900, gene-BS78_K313000
Poaceae	Puccinellia tenuiflora	14	Pt_Chr0106583, Pt_Chr0106605, Pt_Chr0202873, Pt_Chr0205823 ... Pt_Chr0207584, Pt_Chr0500272, Pt_Chr0500273, Pt_Chr0500275, Pt_Chr0702007, Pt_Chr0702066, Pt_Chr0702067, Pt_Chr0704769, Pt_Ctg00314, Pt_Ctg00315
Poaceae	Sporobolus alterniflorus	2	Chr26G000510, Chr27G002390
Poaceae	Thinopyrum elongatum	36	Tel1E01G111500, Tel1E01G154200, Tel2E01G023100 ... Tel2E01G023200, Tel2E01G070500, Tel2E01G070600, Tel2E01G070700, Tel2E01G070900, Tel2E01G071200, Tel2E01G071500, Tel2E01G072100, Tel2E01G073300, Tel2E01G963200, Tel2E01G963300, Tel3E01G001000, Tel3E01G020800, Tel3E01G020900, Tel3E01G886000, Tel3E01G886100, Tel5E01G016400, Tel5E01G651000, Tel5E01G680100, Tel5E01G891100, Tel6E01G109400, Tel6E01G109900, Tel6E01G112800, Tel6E01G113000, Tel6E01G113200, Tel6E01G739900, Tel7E01G002300, Tel7E01G807200, Tel7E01G807300, Tel7E01G807400, Tel7E01G825700, Tel7E01G856200, Tel7E01G858000
Poaceae	Triticum dicoccoides	37	gene_TRIDC1AG000060, gene_TRIDC1AG010440 ... gene_TRIDC1BG013170, gene_TRIDC1BG013210, gene_TRIDC1BG056560, gene_TRIDC1BG070910, gene_TRIDC2AG002440, gene_TRIDC2AG002460, gene_TRIDC2BG002130, gene_TRIDC2BG002660, gene_TRIDC2BG002670, gene_TRIDC2BG002680, gene_TRIDC2BG002720, gene_TRIDC2BG002770, gene_TRIDC2BG002880, gene_TRIDC2BG002890, gene_TRIDC2BG081640, gene_TRIDC2BG085800, gene_TRIDC3BG000040, gene_TRIDC4AG003690, gene_TRIDC4AG072350, gene_TRIDC4BG057810, gene_TRIDC5AG001080, gene_TRIDC5AG059860, gene_TRIDC5AG062460, gene_TRIDC5BG001040, gene_TRIDC5BG001070, gene_TRIDC5BG001150, gene_TRIDC5BG009700, gene_TRIDC6BG000050, gene_TRIDC6BG007380, gene_TRIDC7BG001810, gene_TRIDC7BG061610, gene_TRIDC7BG064400, gene_TRIDC7BG067780, gene_TRIDC7BG070220, gene_TRIDC7BG070340
Poaceae	Triticum aestivum	65	TraesCS1B02G093800.1, TraesCS1B02G348800.1 ... TraesCS1B02G451600.1, TraesCS1B02G451700.1, TraesCS1D02G077800.1, TraesCS1D02G271500.1, TraesCS2A02G023700.1, TraesCS2A02G023800.1, TraesCS2A02G023900.1, TraesCS2A02G024800.2, TraesCS2A02G024900.1, TraesCS2A02G039100.1, TraesCS2A02G465900.1, TraesCS2B02G026800.1, TraesCS2B02G027000.1, TraesCS2B02G033800.1, TraesCS2B02G034000.1, TraesCS2B02G034200.2, TraesCS2B02G034300.1, TraesCS2B02G034600.2, TraesCS2B02G035300.1, TraesCS2B02G036500.1, TraesCS2B02G036600.1, TraesCS2B02G036800.1, TraesCS2B02G552500.1, TraesCS2B02G576600.2, TraesCS2D02G019600.2, TraesCS2D02G024700.1, TraesCS2D02G024900.1, TraesCS2D02G025000.1, TraesCS2D02G025400.2, TraesCS2D02G026500.1, TraesCS2D02G057700.1, TraesCS2D02G068800.1, TraesCS3B02G005100.1, TraesCS3D02G439500.2, TraesCS4A02G026600.1, TraesCS4A02G484000.1, TraesCS4B02G301100.1, TraesCS4B02G343100.1, TraesCS5A02G413900.1, TraesCS5A02G433600.1, TraesCS5D02G005500.1, TraesCS5D02G017400.1, TraesCS5D02G422600.1, TraesCS5D02G502300.1, TraesCS5D02G539100.3, TraesCS6A02G041100.1, TraesCS6A02G041200.1, TraesCS6B02G004100.1, TraesCS6B02G008300.1, TraesCS6B02G044800.1, TraesCS6B02G056700.1, TraesCS6B02G057200.1, TraesCS6B02G057500.1, TraesCS6B02G057600.1, TraesCS7B02G407000.1, TraesCS7B02G445400.2, TraesCS7B02G446400.1, TraesCS7D02G000700.1, TraesCS7D02G487900.1, TraesCS7D02G503700.2, TraesCSU02G008100.1, TraesCSU02G008200.1, TraesCSU02G009400.1
Poaceae	Zea mays	1	Zm00001eb167140_P001
Poaceae	Zoysia japonica	3	nbis-gene-32046, nbis-gene-49063, nbis-gene-49776
Poaceae	Zoysia macrostachya	3	Zma_g13065, Zma_g13067, Zma_g28006