Basic Information
Locus ID:
Pt_Chr0500272
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 6971018 | 6981291 | - | Pt_Chr0500272 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 90,676.03 Da | 43.75 | 85.84 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13768 | von Willebrand factor type A domain | 411 | 564 | 5.9E-8 | IPR002035 |
| Pfam | PF00069 | Protein kinase domain | 19 | 252 | 2.6E-36 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 301 | 5.54E-55 | IPR011009 |
| SUPERFAMILY | SSF53300 | vWA-like | 410 | 581 | 3.64E-15 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 412 | 580 | 7.3E-19 | IPR036465 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 323 | 1.1E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 89 | 6.7E-25 | - |
| SMART | SM00220 | serkin_6 | 17 | 303 | 7.7E-12 | IPR000719 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 411 | 583 | 11.467989 | IPR002035 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 17 | 303 | 28.400166 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 23 | 45 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 153 | 165 | - | IPR008271 |
| Coils | Coil | Coil | 289 | 309 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11330.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_037488023.1 | uncharacterized protein LOC119366395 [Triticum dicoccoides] | 0 |
| Q9SXB8 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3 | 0 | |
| TrEMBL | A0A3B5Z207 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology