halophFGD

Basic Information

Locus ID: Pt_Chr0500241

Species & Taxonomic ID: Puccinellia tenuiflora & 240906

Genome Assembly: GCA_012064385.1

Description: Speckle-type POZ protein-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr05	6161296	6161541	+	Pt_Chr0500241

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.40	9,153.59 Da	64.85	109.51	0.14

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00651	BTB/POZ domain	5	70	1.2E-10	IPR000210
SUPERFAMILY	SSF54695	POZ domain	3	71	8.63E-12	IPR011333
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	1	80	4.3E-14	IPR011333

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_037486012.1	BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides]	0
TrEMBL	A0A3B5XV70	Speckle-type POZ protein OS=Triticum aestivum OX=4565 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

No orthogroup found for Pt_Chr0500241.