Basic Information
Locus ID:
Pt_Chr0500162
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 4073560 | 4077383 | + | Pt_Chr0500162 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 79,389.59 Da | 42.28 | 79.83 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 338 | 369 | 9.18128E-7 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 338 | 369 | 5.8E-8 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 38 | 78 | 2.6E-10 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 432 | 689 | 4.7E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 407 | 692 | 6.83E-66 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 292 | 384 | 9.4E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 503 | 711 | 2.9E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 411 | 502 | 4.3E-25 | - |
| SMART | SM00179 | egfca_6 | 338 | 382 | 2.8E-5 | IPR001881 |
| SMART | SM00220 | serkin_6 | 427 | 695 | 3.7E-19 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 291 | 337 | 8.908776 | IPR000742 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 338 | 375 | 8.528703 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 427 | 692 | 33.163326 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 338 | 365 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 433 | 456 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 356 | 367 | - | IPR000152 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 546 | 558 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 702 | 722 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_022685282.1 | wall-associated receptor kinase 2 [Setaria italica] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A368SAV9 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_8G185300v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology