Basic Information
Locus ID:
Pt_Chr0500148
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 3636102 | 3638753 | - | Pt_Chr0500148 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 96,422.50 Da | 81.42 | 73.86 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 44 | 1.57E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 557 | 778 | 2.35E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 560 | 798 | 2.2E-9 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 186 | 200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 507 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 545 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 490 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27050.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_051229744.1 | uncharacterized protein LOC127347618 [Lolium perenne] | 0 |
| TrEMBL | A0A3B5ZPJ0 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology