Basic Information
Locus ID:
Pt_Chr0405876
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 200684828 | 200687517 | - | Pt_Chr0405876 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 12,954.73 Da | 65.27 | 84.92 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 7 | 95 | 1.62359E-47 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 6 | 116 | 1.1E-43 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 5 | 96 | 1.84E-27 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 101 | 1.5E-42 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 118 | 3.0E-51 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 8 | 76 | 9.438846 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22050.1 | membrane-anchored ubiquitin-fold protein 6 precursor. | 0 |
| RefSeq | XP_047075571.1 | membrane-anchored ubiquitin-fold protein 3-like [Lolium rigidum] | 0 |
| Q6Z8K4 | Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1 | 0 | |
| TrEMBL | F2D1Q6 | Membrane-anchored ubiquitin-fold protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology